CESSHIV-1 database

General information on HIV-1 isolate

# 3504

Accession number	AB371888
Name	JRC78
Subtype	B
Country	Japan
Submitted to NCBI	2007

AB371888 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgaacg gtgagtacgc caat--ttttga ctagcggagg ctagaaggag aga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy