CESSHIV-1 database

General information on HIV-1 isolate

# 1394

Accession number	AF128998
Name	SC49
Subtype	B
Country	Australia
Sampling year	1998
Patient	(patient SC49)

AF128998 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaattttt tactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy