CESSHIV-1 database

General information on HIV-1 isolate

# 172

Accession number	AF443074
Name	96BWMO1.5
Subtype	C
Country	Botswana
Sampling year	1996
Patient	MO1

AF443074 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag g-ggcggctgg tgagtacgcc attttatttg actagcggag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy