CESSHIV-1 database

General information on HIV-1 isolate

# 3438

Accession number	AY676592
Name	SNS40
Subtype	A1
Country	Angola
Sampling year	2001
Patient	SNS40

AY676592 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacgcagcan gaggcgagng -cggcgactgg tgagtacgcc aaa--ttttgac tagcggaggc tagangggga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy