CESSHIV-1 database

General information on HIV-1 isolate

# 3439

Accession number	AY676593
Name	LFA17
Subtype	A1
Country	Angola
Sampling year	2001
Patient	LFA17

AY676593 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctganggt gcacacagca agaggctnag angcgacgac tggtgagtac gcctagaaat ttttgactag caganagcta ataggnagag a

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy