CESSHIV-1 database

General information on HIV-1 isolate

# 1673

Accession number	EF178336
Name	MS2004_37_038
Subtype	B
Country	Australia
Sampling year	2004
Patient	- (5914671)

EF178336 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gaggcgactg gtgagtacgc caaaattttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

AY857083(#3551)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy