CESSHIV-1 database

General information on HIV-1 isolate

# 1015

Accession number	EF514705
Name	CTL 017
Subtype	B
Country	Denmark
Sampling year	2001
Patient	CTL-017

EF514705 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc cgata-ttttg actagcggag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy