CESSHIV-1 database

General information on HIV-1 isolate

# 1809

Accession number	EF694037
Name	11807 clone 1
Subtype	B
Country	India
Submitted to NCBI	2007

EF694037 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgaccg gtgagtacgc caaaaatttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

EU047606(#1600) EU047609(#1812) EU047618(#1820) EU047621(#1823) GU595153(#3311)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy