CESSHIV-1 database

General information on HIV-1 isolate

# 1004

Accession number	EU000514
Name	INDARI-0218440 clone 3
Subtype	BC
Country	India
Sampling year	2002
Patient	8

EU000514 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gggctcggct tgctgaagtg cactcggcaa gaggcgagag g-ggcggctgg tgagtacgcc aattttattt gactagcggg ggctagaagg agaga

Isolates with identical sequences of region:

EU000513(#1003)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy