CESSHIV-1 database

General information on HIV-1 isolate

# 3238

Accession number	FJ670531
Name	P2008
Subtype	B
Country	Spain
Sampling year	2008
Patient	P2008

FJ670531 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc ctaaaaattt tttgactagc ggaggctaga aggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy