CESSHIV-1 database

General information on HIV-1 isolate

# 1418

Accession number	AY118154
Name	93UG66
Subtype	AC
Country	Uganda
Sampling year	1993
Patient	93UG66

AY118154 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing 123 nt 3' terminus

The primary sequence:

cactgcttaa gcctcaataa agcttgcctt gagtgctcta agtagtgtgt gcccgtctgt tgtgtgactc tggtaactag agatccctca gacacctttt gtcagtgtgg aaaatctcta gca

Isolates with identical sequences of region:

AF196740(#1306) AF254719(#1507)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy