CESSHIV-1 database

General information on HIV-1 isolate

# 1220

Accession number	DQ275642
Name	03ZASK067B1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	067B1

DQ275642 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccttt ttggt-agtgt ggaaaatctc tagcagtggc gcccgaacag ggacccgaaa gcgaaagtaa gaccagagga aatctctcga cgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy