CESSHIV-1 database

General information on HIV-1 isolate

# 643

Accession number	DQ369977
Name	03ZAPS042MB1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	042MB

DQ369977 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtgg ctctggtaac tagagatccc tcagaccctt tgtggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agcgaaagta agaccagagg agatctctcg acgcaggac

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy