CESSHIV-1 database

General information on HIV-1 isolate

# 3241

Accession number	FJ670528
Name	X772-8
Subtype	CRF14_BG
Country	Spain
Sampling year	2005
Patient	X772

FJ670528 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccact ctagatagtg ta-aaaatctc tagcagtggc gcccgaacag ggacttgaaa gcgaaagtta acagggactc gaaagcgaaa gtt---ccagaga agttctctcg acgcaggac

Isolates with identical sequences of region:

AY900578(#1426) FJ670518(#3244)

CESSHIV-1 DATABASE

General information on HIV-1 isolate

The region encompassing PBS domain

The primary sequence:

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy