CESSHIV-1 database

General information on HIV-1 isolate

# 4

Accession number	M27323
Name	NDK
Subtype	D
Country	DRC
Sampling year	1983
Patient	NDK

M27323 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagatccgt ttagtccgag tgaaaaatct ctagcagtgg cgcccgaaca gggacctgaa agcgaaagta gaaccagaga agatctctcg acgcaggac

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy