CESSHIV-1 database

General information on HIV-1 isolate

# 167

Accession number	X04415
Name	MAL
Subtype	A1DK
Country	DRC
Sampling year	1985
Patient	MAL

X04415 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccact ctagacggtg ta-aaaatctc tagcagtggc gcccgaacag ggactttaaa gtgaaagtaa cagggactcg aaagcggaag tt---ccagagaa gttctctcga cgcaggac

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy