CESSHIV-1 database

General information on HIV-1 isolate

# 3182

Accession number	AY047306
Name	TV010
Subtype	C
Country	South Africa
Sampling year	1998
Patient	TV010

AY047306 isolate has foldings of [Core poly(A) site] [123nt 3' terminus] [USE domain, TAR, polyA] [USE region] [227nt 3' terminus] [Complete poly(A) region] [USE, TAR, polyA] .

The region encompassing Complete poly(A) region

The primary sequence:

tcaaccctca gatgctgcat ataagcagct gcttttcgct tgtactgggt ctctctaggt agaccagatc tgagcccggg agctctctgg ctatctaggg aacccactgc ttaagcctca ataaagcttg ccttgagtgc tataagtagt gtgtgcccgt ctgttgtgtg actctggtaa 

Isolates with identical sequences of region:

AB191646(#1172)

CESSHIV-1 DATABASE

General information on HIV-1 isolate

The region encompassing Complete poly(A) region

The primary sequence:

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy