General information on HIV-1 isolate
# 2477
| Accession number |
L28909 |
| Name | 4C1LTR |
| Subtype | B |
| Country | USA |
| Submitted to NCBI |
1994 |
| Patient | 4 |
L28909 isolate has foldings of [PBS region] [Core poly(A) site] [123nt 3' terminus] [USE domain, TAR, polyA] [USE region] [227nt 3' terminus] [Complete poly(A) region] [USE, TAR, polyA] .
The region encompassing 227 nt 3' terminusThe primary sequence:
cgavccctca gatgctgcat ataagcagcc gctttgtcgc ctgtactggg tctctctggt tagaccagat ctgagcctgg gagctctctg gctaactagg gaacccactg cttaagcctc aataaagctt gccttgagtg ctttaagtag tgtgtgcccg tctgttgtgt gactctggtg actagagatc cctcagaccc ctttagtcag tgtggaaaat ctctagca
The optimal secondary structure:
The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy
