CESSHIV-1 database

General information on HIV-1 isolate

# 1030

Accession number	EU110085
Name	ML752
Subtype	A1
Country	Kenya
Sampling year	2001
Patient	ML752

EU110085 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc at---ttttgact agcggaggct agaaggagag a

Isolates with identical sequences of region:

AB052610(#1066) AF361873(#1406) EU448295(#1044) FJ670519(#3173)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy